Function reference • protGear

All functions
`array_vars()`	List the array structure variables
`best_CV_estimation()`	best CV estimation
`bg_correct()`	bg_correct
`buffer_spots()`	Extract buffer spots of data
`check_sampleID_files()`	\\_End_Function_\\ # Check existing sample ID names
`create_dir()`	Title Create directory function
`cv_by_sample_estimation()`	cv by sample
`cv_estimation()`	cv_estimation
`extract_bg()`	extract bg
`launch_protGear_interactive()`	launch_protGear_interactive
`launch_select()`	launch_select
`matrix_normalise()`	Normalize Arrays
`merge_sampleID()`	Merge sample ID with the array data
`minpositive()`	Get the minimum positive value
`name_of_files()`	Object names of a list
`output_trend_stats()`	Trend test using Cox–Stuart (C–S) and Mann–Kendall (M–K) trend tests
`plot_bg()`	Plot background
`plot_buffer()`	Plot the buffer values
`plot_FB()`	plot_FB
`plot_normalised()`	Comparison of normalised data by sample
`plot_normalised_antigen()`	Comparison of normalised data by feature
`read_array_files()`	Read array files
`read_array_visualize()`	Read a gpr file to visualize
`rlm_normalise_matrix()`	Nomrmalise using RLM
`tag_subtract()`	tag_subtract
`visualize_slide()`	Visualize the slide mimicking the original scan image.
`visualize_slide_2d()`	Visualize the slide mimicking the original scan image using a 2d plot.

Reference